Using Reactive-System Modeling Techniques to Create Executable Models of Biochemical Pathways

Hadas Lapid, Assaf Marron, Smadar Szekely, David Harel

Abstract

Scenario-based modeling (SBM) is an emerging approach for creating executable models of complex reactive systems. In addition to its use in software and system development, SBM has been shown to serve well in modeling biological processes. In this position paper, we show that SBM can be used effectively in modeling biochemical pathways at the molecular level, complementing existing biochemical modeling techniques. One of the key benefits of these SBM models is in helping professionals and students better conceptualize and understand such complex processes.

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Paper Citation


in Harvard Style

Lapid H., Marron A., Szekely S. and Harel D. (2019). Using Reactive-System Modeling Techniques to Create Executable Models of Biochemical Pathways.In Proceedings of the 7th International Conference on Model-Driven Engineering and Software Development - Volume 1: MODELSWARD, ISBN 978-989-758-358-2, pages 456-466. DOI: 10.5220/0007572504560466


in Bibtex Style

@conference{modelsward19,
author={Hadas Lapid and Assaf Marron and Smadar Szekely and David Harel},
title={Using Reactive-System Modeling Techniques to Create Executable Models of Biochemical Pathways},
booktitle={Proceedings of the 7th International Conference on Model-Driven Engineering and Software Development - Volume 1: MODELSWARD,},
year={2019},
pages={456-466},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0007572504560466},
isbn={978-989-758-358-2},
}


in EndNote Style

TY - CONF

JO - Proceedings of the 7th International Conference on Model-Driven Engineering and Software Development - Volume 1: MODELSWARD,
TI - Using Reactive-System Modeling Techniques to Create Executable Models of Biochemical Pathways
SN - 978-989-758-358-2
AU - Lapid H.
AU - Marron A.
AU - Szekely S.
AU - Harel D.
PY - 2019
SP - 456
EP - 466
DO - 10.5220/0007572504560466