Prediction of Protein X-ray Crystallisation Trial Image Time-courses

B. M. Thamali Lekamge; Arcot Sowmya; Janet Newman

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Paper

Prediction of Protein X-ray Crystallisation Trial Image Time-courses

Topics: Active Learning; Classification; Image Understanding; Medical Imaging

In Proceedings of the 6th International Conference on Pattern Recognition Applications and Methods ICPRAM - Volume 1, 663-668, 2017 , Porto, Portugal

Authors: B. M. Thamali Lekamge ¹ ; Arcot Sowmya ¹ and Janet Newman ²

Affiliations: ¹ University of New South Wales, Australia ; ² CSIRO Biomedical Program, Australia

Keyword(s): Random Forests, Protein Crystallisation, Outcome Prediction.

Related Ontology Subjects/Areas/Topics: Active Learning ; Applications ; Classification ; Computer Vision, Visualization and Computer Graphics ; Image Understanding ; Medical Imaging ; Pattern Recognition ; Software Engineering ; Theory and Methods

Abstract: This paper presents an algorithm to predict the outcome of a protein x-ray crystallisation trial. Results obtained from classification of individual images in a time-course are used, along with random forests, to make a prediction of the time-course outcome. Experiments on multiple datasets show that the first 8 frames of each time-course are quite sufficient to predict the final outcome.

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Paper citation in several formats:

Lekamge, B.; Sowmya, A. and Newman, J. (2017). Prediction of Protein X-ray Crystallisation Trial Image Time-courses. In Proceedings of the 6th International Conference on Pattern Recognition Applications and Methods - ICPRAM; ISBN 978-989-758-222-6; ISSN 2184-4313, SciTePress, pages 663-668. DOI: 10.5220/0006246506630668

@conference{icpram17,
author={B. M. Thamali Lekamge. and Arcot Sowmya. and Janet Newman.},
title={Prediction of Protein X-ray Crystallisation Trial Image Time-courses},
booktitle={Proceedings of the 6th International Conference on Pattern Recognition Applications and Methods - ICPRAM},
year={2017},
pages={663-668},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0006246506630668},
isbn={978-989-758-222-6},
issn={2184-4313},
}

TY - CONF

JO - Proceedings of the 6th International Conference on Pattern Recognition Applications and Methods - ICPRAM
TI - Prediction of Protein X-ray Crystallisation Trial Image Time-courses
SN - 978-989-758-222-6
IS - 2184-4313
AU - Lekamge, B.
AU - Sowmya, A.
AU - Newman, J.
PY - 2017
SP - 663
EP - 668
DO - 10.5220/0006246506630668
PB - SciTePress