Addressing Entity Change in Procedural Ontologies

Tyler Johnson; Mohammed Alliheedi; Yetian Wang; Robert Mercer

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Paper

Addressing Entity Change in Procedural Ontologies

Topics: Domain Ontologies; Ontology Engineering; Ontology Sharing and Reuse

In Proceedings of the 15th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - Volume 2: , 280-287, 2023 , Rome, Italy

Authors: Tyler Johnson ¹ ; Mohammed Alliheedi ² ; Yetian Wang ³ and Robert Mercer ¹

Affiliations: ¹ Department of Computer Science, The University of Western Ontario, London, Canada ; ² Department of Computer Science, Al-Baha University, Al Bahah 65527, Saudi Arabia ; ³ David R. Cheriton School of Computer Science, University of Waterloo, Waterloo, Canada

Keyword(s): Experimental Procedure, Procedural Steps, Biochemical Ontology, Time Series, Forward-Backward Sequencing.

Abstract: Ontologies model a domain by representing the entities, concepts, and the relations between them. The domain of interest in this position paper is the biochemistry experimental procedure. These procedures are composed of procedure steps. These steps represent actions. Actions cause change, a concept being implicitly modelled in this type of ontology. We argue that entities undergoing change need to be properly captured in the ontology. The biochemistry procedure Alkaline Agarose Gel Electrophoresis is used to demonstrate the generality of this procedural ontology.

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Paper citation in several formats:

Johnson, T.; Alliheedi, M.; Wang, Y. and Mercer, R. (2023). Addressing Entity Change in Procedural Ontologies. In Proceedings of the 15th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - KEOD; ISBN 978-989-758-671-2; ISSN 2184-3228, SciTePress, pages 280-287. DOI: 10.5220/0012239900003598

@conference{keod23,
author={Tyler Johnson. and Mohammed Alliheedi. and Yetian Wang. and Robert Mercer.},
title={Addressing Entity Change in Procedural Ontologies},
booktitle={Proceedings of the 15th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - KEOD},
year={2023},
pages={280-287},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0012239900003598},
isbn={978-989-758-671-2},
issn={2184-3228},
}

TY - CONF

JO - Proceedings of the 15th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - KEOD
TI - Addressing Entity Change in Procedural Ontologies
SN - 978-989-758-671-2
IS - 2184-3228
AU - Johnson, T.
AU - Alliheedi, M.
AU - Wang, Y.
AU - Mercer, R.
PY - 2023
SP - 280
EP - 287
DO - 10.5220/0012239900003598
PB - SciTePress