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Authors: Cuong C. To and Tuan D. Pham

Affiliation: University of New South Wales, Australia

Keyword(s): Entropy, Time series, Mass spectrometry, Genetic algorithms.

Related Ontology Subjects/Areas/Topics: Applications and Services ; Artificial Intelligence ; Biomedical Engineering ; Biomedical Signal Processing ; Computer Vision, Visualization and Computer Graphics ; Data Manipulation ; Health Engineering and Technology Applications ; Human-Computer Interaction ; Medical Image Detection, Acquisition, Analysis and Processing ; Methodologies and Methods ; Neurocomputing ; Neurotechnology, Electronics and Informatics ; Pattern Recognition ; Physiological Computing Systems ; Sensor Networks ; Soft Computing

Abstract: Entropy methods including approximate entropy (ApEn), sample entropy (SampEn) and multiscale entropy (MSE) have recently been applied to measure the complexity of finite length time series for classification of diseases. In order to effectively use these entropy methods, parameters such as m, r, and scale factor (in MSE) are to be determined. So far, there have been no general rules to select these parameters as they depend on particular problems. In this paper, we introduce a genetic algorithm (GA) based method for optimal selection of these parameters in a sense that the entropic difference between healthy and pathologic groups are maximized.

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Paper citation in several formats:
C. To, C. and D. Pham, T. (2011). COMPLEXITY ANALYSIS OF MASS SPECTROMETRY DATA FOR DISEASE CLASSIFICATION USING GA-BASED MULTISCALE ENTROPY. In Proceedings of the International Conference on Bio-inspired Systems and Signal Processing (BIOSTEC 2011) - BIOSIGNALS; ISBN 978-989-8425-35-5; ISSN 2184-4305, SciTePress, pages 5-14. DOI: 10.5220/0003119800050014

@conference{biosignals11,
author={Cuong {C. To}. and Tuan {D. Pham}.},
title={COMPLEXITY ANALYSIS OF MASS SPECTROMETRY DATA FOR DISEASE CLASSIFICATION USING GA-BASED MULTISCALE ENTROPY},
booktitle={Proceedings of the International Conference on Bio-inspired Systems and Signal Processing (BIOSTEC 2011) - BIOSIGNALS},
year={2011},
pages={5-14},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0003119800050014},
isbn={978-989-8425-35-5},
issn={2184-4305},
}

TY - CONF

JO - Proceedings of the International Conference on Bio-inspired Systems and Signal Processing (BIOSTEC 2011) - BIOSIGNALS
TI - COMPLEXITY ANALYSIS OF MASS SPECTROMETRY DATA FOR DISEASE CLASSIFICATION USING GA-BASED MULTISCALE ENTROPY
SN - 978-989-8425-35-5
IS - 2184-4305
AU - C. To, C.
AU - D. Pham, T.
PY - 2011
SP - 5
EP - 14
DO - 10.5220/0003119800050014
PB - SciTePress