Identification and Correction of Misspelled Drugs’ Names in Electronic Medical Records (EMR)
Faiza Hussain, Usman Qamar
2016
Abstract
Medications are an important element of medical records but they usually contain significant data errors. This situation may result from haphazardness or possibly careless storage of valuable information. In either case, this misspelled data can cause serious health problems for the patients and can put their life at a major risk. Thus, the correctness of medication data is an important aspect so that potential harms can be identified and steps can be taken to prevent or mitigate them. In this paper, a novel and practical method is proposed for automated detection and correction of spelling errors in electronic medical record (EMR). To realize this technique, major relevant aspects is taken into consideration with the help of Parts-of-Speech tagging and Regular Expressions. The paper concludes with recommendations and future work for giving a new direction to the emendation of drug nomenclature.
References
- Brockett, C., Dolan, W.B. and Gamon, M., 2006, July. Correcting ESL errors using phrasal SMT techniques. In Proceedings of the 21st International Conference on Computational Linguistics and the 44th annual meeting of the Association for Computational Linguistics (pp. 249-256). Association for Computational Linguistics.
- Crowell, J., Zeng, Q., Ngo, L., and Lacroix, E.M., 2004. A frequency-based technique to improve the spelling suggestion rank in medical queries. Journal of the American Medical Informatics Association, 11(3), pp.179-185.
- DesRoches, C.M., Campbell, E.G., Rao, S.R., Donelan, K., Ferris, T.G., Jha, A., Kaushal, R., Levy, D.E., Rosenbaum, S., Shields, A.E. and Blumenthal, D., 2008. Electronic health records in ambulatory care-a national survey of physicians. New England Journal of Medicine, 359(1), pp.50-60.
- Divita, G. 2003. Spelling Suggestion Tools (Gspell), National Library of Medicine. Available at http://lexsrv3.nlm.nih.gov/LexSysGroup/Projects/gSpe ll/current/GSpell.html.
- Ehsan, N., and Faili, H., 2013. Grammatical and context sensitive error correction using a statistical machine translation framework. Software: Practice and Experience, 43(2), pp.187-206.
- Kukich, K., 1992. Techniques for automatically correcting words in text.ACM Computing Surveys (CSUR), 24(4), pp.377-439.
- Levenshtein, V.I., 1966, February. Binary codes capable of correcting deletions, insertions, and reversals. In Soviet physics doklady (Vol. 10, No. 8, pp. 707- 710).
- Manning, C.D., Raghavan, P. and Schütze, H., 2008. Introduction to information retrieval (Vol. 1, No. 1, p. 496). Cambridge: Cambridge university press.
- Manning, C.D., 2011. Part-of-speech tagging from 97% to 100%: is it time for some linguistics? In Computational Linguistics and Intelligent Text Processing (pp. 171-189). Springer Berlin Heidelberg.
- Monson, R.A., and Bond, C.A., 1978. The accuracy of the medical record as an index of outpatient drug therapy. JAMA, 240(20), pp.2182-2184.
- Nordenfelt, L., 2013. Identification and classification of diseases: Fundamental problems in medical ontology and epistemology. Studia Philosophica Estonica, 6(2), pp.6-21.
- Patrick, J.D. and Nguyen, D., 2011. Automated Proof Reading of Clinical Notes. In PACLIC (pp. 303-312).
- Perreault, L.E. and Shortliffe, E.H., 1990. Medical Informatics: Computer Applications in Health Care. Addison-Wesley.
- Price, D., Cooke, J., Singleton, S. and Feely, M., 1986. Doctors' unawareness of the drugs their patients are taking: a major cause of overprescribing? BMJ, 292(6513), pp.99-100.
- Richard Pless. 2004. "An Introduction to Regular Expressions with Examples from Clinical Data", IL, SUGI Proceedings. Available at http://www2.sas. com/proceedings/sugi29/043-29.pdf.
- Ruch, P., Baud, R. and Geissbühler, A., 2003. Using lexical disambiguation and named-entity recognition to improve spelling correction in the electronic patient record. Artificial intelligence in medicine, 29(1), pp.169-184.
- Senger, C., Kaltschmidt, J., Schmitt, S.P., Pruszydlo, M.G., and Haefeli, W.E., 2010. Misspellings in drug information system queries: characteristics of drug name spelling errors and strategies for their prevention. International journal of medical informatics, 79(12), pp.832-839.
- Siklósi, B., Novák, A. and Prószéky, G., 2016. Contextaware correction of spelling errors in Hungarian medical documents. Computer Speech & Language, 35, pp.219-233.
- Spooner, L.M. and Pesaturo, K.A., 2013. The Medical Record. Fundamental Skills for Patient Care in Pharmacy Practice, p.37.
- Turchin, A., Chu, J.T., Shubina, M. and Einbinder, J.S., 2007. Identification of misspelled words without a comprehensive dictionary using prevalence analysis. In AMIA Annual Symposium Proceedings (Vol. 2007, p. 751). American Medical Informatics Association.
- Wagner, M.M. and Hogan, W.R., 1996. The accuracy of medication data in an outpatient electronic medical record. Journal of the American Medical Informatics Association, 3(3), p.234.
- https://github.com/darylc123/diabetes-prediction/blob/mas ter/trainingSet/training_SyncAllergy.csv.
Paper Citation
in Harvard Style
Hussain F. and Qamar U. (2016). Identification and Correction of Misspelled Drugs’ Names in Electronic Medical Records (EMR) . In Proceedings of the 18th International Conference on Enterprise Information Systems - Volume 2: ICEIS, ISBN 978-989-758-187-8, pages 333-338. DOI: 10.5220/0005911503330338
in Bibtex Style
@conference{iceis16,
author={Faiza Hussain and Usman Qamar},
title={Identification and Correction of Misspelled Drugs’ Names in Electronic Medical Records (EMR)},
booktitle={Proceedings of the 18th International Conference on Enterprise Information Systems - Volume 2: ICEIS,},
year={2016},
pages={333-338},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0005911503330338},
isbn={978-989-758-187-8},
}
in EndNote Style
TY - CONF
JO - Proceedings of the 18th International Conference on Enterprise Information Systems - Volume 2: ICEIS,
TI - Identification and Correction of Misspelled Drugs’ Names in Electronic Medical Records (EMR)
SN - 978-989-758-187-8
AU - Hussain F.
AU - Qamar U.
PY - 2016
SP - 333
EP - 338
DO - 10.5220/0005911503330338