Metabolite Profiling of Ethyl Acetate Extract from Marsilea
crenata Presl. Using UPLC-QToF-MS/MS
Burhan Ma’arif*
1, 2
, Mangestuti Agil
3
1
Doctoral Program of Pharmaceutical Sciences, Department of Pharmacognosy and Phytochemistry,
Faculty of Pharmacy, Universitas Airlangga, Surabaya, Indonesia.
2
Department of Pharmacy, Faculty of Medical and Health Science, Maulana Malik Ibrahim
State Islamic University, Malang, Indonesia
3
Department of Pharmacognocy and Phytochemistry, Faculty of Pharmacy,
Universitas Airlangga, Surabaya, Indonesia
Keywords: Marsilea crenata Presl., Metabolite Profiling, UPLC-QToF-MS/MS, Phytoestrogens
Abstract: Marsilea crenata Presl. is a plant that widely used as traditional food in Surabaya, Indonesia. Although in
some research it was known contain phytoestrogens which have activity in bone formation, the
phytochemical properties of M. crenata has not been completely confirmed yet. The aim of this research
was to determine the metabolite profile of ethyl acetate extract of M. crenata using UPLC-QToF-MS/MS,
which can be used as a reference for further research and utilization of M. crenata. Dried powder of M.
crenata was extracted with n-hexane followed by ethyl acetate. The 100 ppm of ethyl acetate extract in
DCM and methanol then injected 5 µl each into the UPLC-QToF-MS/MS. The results were analyzed by
Masslynx 4.1 software, and showed various types of compounds, either detected compounds (36
compounds), or unknown compounds.
1 INTRODUCTION
Marsilea. crenata Presl. is an aquatic plant that
widely used as an ingredient for traditional food in
Surabaya, Indonesia (Nurjanah and Abdullah, 2012;
Ma’arif et al., 2016).
Figure 1: Marsilea crenata Presl.
Some of the research that had been done showed
that 96% ethanol extract, n-hexane extract, and ethyl
acetate extract of M. crenata leaves can inhibit
osteoporosis in female mouse (mus musculus) with
mechanism of bone formation improvement
(Laswati, 2011; Aemi, 2012; Adityara, 2017;
Widiasari, 2017). Other studies were also showed
that n-hexane extract of M. crenata leaves can
increase the alkaline phosphatase production in
MC3T3-E1 preosteoblast cell differentiation
process, which indirectly also play a role in bone
formation improvement (Ma’arif et al., 2018).
This activity appears to be suspected because of
the phytoestrogens content in M. crenata, where
phytoestrogens can bind to estrogen receptors (ERs)
in osteoblasts to increase their activity (Cos et al.,
2003; Villiers, 2009). Phytoestrogens are a group of
compounds contained in plants which have estrogen-
like structures or can replace the function of
estrogen, both in association with estrogen receptors
(ER-dependent) and not (ER-independent) (Ososki
and Kennelly, 2003; Yang et al., 2012; Cui et al.,
2013).
Although it has great potential as a medicinal
plants, the phytochemical properties of M. crenata
has not been completely confirmed yet. This
research was done to identify the metabolite profile
of ethyl acetate extract of M. crenata using UPLC-
QToF-MS/MS, which can be used as a reference for
further research and utilization of M. crenata.
Ma’arif, B. and Agil, M.
Metabolite Profiling of Ethyl Acetate Extract from Marsilea crenata Presl. Using UPLC-QToF-MS/MS.
DOI: 10.5220/0009841900002406
In Proceedings of BROMO Conference (BROMO 2018) - Symposium on Natural Product and Biodiversity, page 1
ISBN: 978-989-758-347-6
Copyright
c
2022 by SCITEPRESS – Science and Technology Publications, Lda. All rights reserved
1
UPLC-QToF-MS/MS is a powerful technique used
for metabolite profiling which has improved in
performance of chromatographic resolution, speed
and sensitivity analysis, saves time, also reduces
solvent consumption (Patil et al., 2011),
The ethyl acetate extract was selected because in
the preliminary study using TLC visualizer, this
extract showed the best TLC profile (Figure 2).
Whereas metabolite profiling of n-hexane extract
has been done before (Ma’arif et al., 2016).
Figure 2: TLC profile of : a. 96% ethanol extract; b. n-
hexane extract; c. ethyl acetate extract; and d. metanol
extract; from M. crenata leaves at λ 366 nm.
2 MATERIAL AND METHODS
2.1 Material
2.1.1 Plant Material
M. crenata were collected in Benowo, Surabaya,
Indonesia at November 2017, and identified in UPT
Materia Medica, Batu, Indonesia at December 2017
with specimen number 1a-17b-18a-1. The leaves
were prepared to get dry powder of M. crenata.
2.1.2 Chemical
All chemicals were grade of analytical reagent
and used as received. N-hexane, and ethyl acetate as
solvent were purchased from Pharmacy Department,
Faculty of Medical and Health Science, Maulana
Malik Ibrahim State Islamic University.
Dichloromethane, metanol, acetonitrile, and formic
acid as solvent and mobile phase on UPLC-QToF-
MS/MS were purchased from Central Forensic
Laboratory Badan Reserse Kriminal Kepolisian
Negara Republik Indonesia.
2.2 Methods
2.2.1 Extraction
Dry powder of M. crenata leaves were extracted
with n-hexane first. Its residue then re-extracted with
ethyl acetate. In the preliminary study, the 96%
ethanol extract was obtained by directly extracting
dry powder of M. crenata, while methanol extract
was obtained from re-extracting residue of ethyl
acetate extract with methanol. All extraction process
was using ultrasonic assisted extraction method
(Sonica 5300EP S3). This process was repeated,
collecting all the supernatants, which were finally
evaporated in a rotary evaporator (Heidolph) to get
ethyl acetate extract.
2.2.2 Analysis with UPLC-QToF-MS/MS
A simple, rapid, reliable and precise reversed
phase UPLC-QToF-MS/MS method has been
developed and validated according to the regulator
guidelines. The ethyl acetate preparation was done
using solid phase extraction, 100 ppm of ethyl
acetate extract in DCM and methanol then injected 5
µl each into the an ACQUITY UPLC
®
H-Class
System (Waters, USA) coupled to an MS detector
Xevo G2-S QToF (Waters, USA). Sample were
separated on an ACQUITY BEH C
18
(1.7 µm 2.1x50
mm) with acetonitril + 0.05 % formic acid and water
+ 0.05 % formic acid as mobile phase, with flowrate
0.2 ml/min. The results of UPLC-MS analysis was
processed using the Masslynx Version 4.1 software,
to obtain the data of peak and m / z spectra of each
detected peak. The compound content can then be
predicted using the chemspider website.
3 RESULTS AND DISCUSSION
A total of 300 g dry powder of M. crenata leaves
were extracted with n-hexane and then ethyl acetate
to produce 2.82 g extract. The dry powder need to be
extracted first with n-hexane to remove impurities
which may interfere with the identification process,
such as fatty acid compounds. Ethyl acetate extract
of M. crenata were analysed by UPLC-QToF-
MS/MS to better interpret the diversity of available
phytochemicals.
BROMO 2018 - Bromo Conference, Symposium on Natural Products and Biodiversity
2
Table 1: Predicted compounds of ethyl acetate extract from M. crenata leaves in DCM solvent
No.
RT
(min)
% Area
Measured
m/z
Molecular
Formula
Proposed Metabolite
Activity
1
1.272
0.3022
150.0280
Unknown
Unknown
-
2
1.420
0.2059
119.0944
Unknown
Unknown
-
3
2.118
1.0502
201.1728
C
11
H
23
NO
2
11-Aminoundecanoic acid
-
4
2.598
1.7620
122.0842
C
7
H
10
N
2
2-Pyridylethylamine
Histamine agonist
(Kunkel and Dixon,
1984)
5
4.427
0.2680
301.1890
C
15
H
27
NO
5
Megalanthonine
Antifungal (Reina
et al., 1998)
6
4.828
0.0245
378.1862
C
21
H
30
O
4
S
Tixocortol
Corticosteroid,
antiinflammatory
(Friedman and
Metcalfe, 1991),
decongestant
(Cuenant et al.,
1986)
7
4.930
0.0063
299.1944
C
12
H
29
NO
7
Unknown
-
8
5.193
0.0799
315.1134
Unknown
Unknown
-
9
5.342
0.1373
149.1203
Unknown
Unknown
-
10
5.479
0.0713
431.2729
Unknown
Unknown
-
11
5.662
0.0830
210.1255
Unknown
Unknown
-
12
5.959
0.0335
519.3245
C
27
H
45
N
5
O
3
S
3,5-Isothiazoledicarboxamide, 4-
amino-N
3
,N
5
-dicyclohexyl-N
5
-
[1-[[(3-methylbutyl) amino]
carbonyl]butyl]-
-
13
6.211
0.0193
545.3508
Unknown
Unknown
-
14
6.623
0.0089
462.2615
C
13
H
39
N
10
O
4
PS
Unknown
-
15
7.206
0.4010
196.1099
C
11
H
16
O
3
1-carboxy-3-hydroxyadamantane
-
16
7.972
0.1522
271.1930
C
12
H
26
N
5
P
Pyrrolidine, 1,1',1''-
(hydrazinylidenephosphoranylidy
ne)tris-
-
17
9.733
0.0992
256,1936
C
17
H
24
N
2
1H-Benzimidazole, 1-(2-
cyclohexylethyl)-5,6-dimethyl-
Antituberculosis,
antibacterial (Gobis
et al., 2015)
18
10.967
0.4997
191.1309
Unknown
Unknown
-
19
11.448
1.0321
241.2772
C
16
H
35
N
Hexadecylamine
Antibacterial,
adjuvant for
diphtheria, tetanus
toxoid, and
antiinfluenza
(Attwood and
Florence, 2012)
20
11.630
0.5779
386.1728
C
22
H
26
O
6
Benzophenone, 2-(1-
ethylacetonyl)-3',4,4',5-
tetramethoxy-
-
21
11.882
0.0066
310.1203
C
19
H
18
O
4
Benzylbutylphthalate
Estrogenic activity
(Harris et al., 1997)
22
12.111
0.1000
310.1775
C
17
H
26
O
5
Portentol
Metabolite Profiling of Ethyl Acetate Extract from Marsilea crenata Presl. Using UPLC-QToF-MS/MS
3
23
12.842
0.1933
3032925
C
21
H
37
N
Pregnan-3-amine
-
24
13.345
0.0078
228.1152
C
15
H
16
O
2
Bisphenol A
Estrogenic activity
(Hewitt and
Korach, 2010)
25
13.940
0.1502
567.4201
C
36
H
58
NO
2
P
Dibenzo[d,f][1,3,2]dioxaphosphe
pin-6-amine, N,N-dibutyl-
2,4,8,10-tetrakis(1,1-
dimethylethyl)-
-
26
14.077
0.1513
531.3416
C
28
H
45
N
5
O
5
Glycine, N-[[(E)-2-(4-
methoxyphenyl)diazenyl]carbony
l]leucyl-, compd. with N-
cyclohexylcyclohexanamine
(1:1)
-
27
15.038
3.7928
627.1884
C
33
H
30
N
5
O
6
Cl
1H,5H-Pyrrolo[3,4-
g][1,2,4]triazolo[1,2-a]cinnoline-
1,3,8,10(2H,7H,9H)-tetrone, 7-
(3-chloro-4-hydroxy-5-
methoxyphenyl)-7a,10a,11,11a-
tetrahydro-2-methyl-9-[(4-
methylphenyl)amino]-7a-phenyl-
-
28
16.970
36.4625
775.2261
C
38
H
38
N
5
O
1
1
Cl
(1R,13S,16S,17R,28R)-28-
Amino-20-chloro-17,25-
dihydroxy-5,8,10,24-
tetramethoxy-N-methyl-
15,29,31-trioxo-22-oxa-
14,30,32triazahexacyclo
[14.14.2.2
18,21
.1
2,6
.1
23,27
.0
7,12
]hex
atriaconta-2(36),3,5
,7,9,11,18,20,23(33),24,26,34-
dodecaene-13-carboxamide
-
29
17.633
34.5167
592.2692
C
30
H
33
N
12
P
Unknown
-
30
17.885
10.8884
849.2460
C
52
H
41
N
5
OP
SCl
Unknown
-
31
18.330
6.4550
701.2070
Unknown
Unknown
-
32
21.658
0.0608
156.9950
C
4
H
3
N
3
O
2
S
1H-Pyrazolo[3,4-d]thiazole-
3,5(2H,6H)-dione
-
Table 2: Predicted compounds of ethyl acetate extract from M. crenata leaves in methanol solvent
No.
RT
(min)
% Area
Measure
d m/z
Molecular
Formula
Proposed Metabolite
Activity
1
0.581
0.0068
124.9797
C
3
H
5
NCl
2
3,3-Dichloro-2-propen-1-
amine
-
2
1.500
1.0634
235.1421
C
10
H
22
NO
5
Nitromethanetrispropanol
-
3
2.266
0.1459
122.0478
C
6
H
6
N
2
O
Nicotinamide
Activity of diphosphate
(ADP) -
ribosyltransferase
(Maurer et al., 2012),
anti-SIRT2 (Cui et al.,
2014).
4
4.016
0.0642
124.9789
Unknown
Unknown
5
5.045
0.1590
149.1201
C
10
H
15
N
(S)-(+)-Methamphetamine
Increase activity of
neurotransmiter
norepinefrin and
dopamine, reduce
appetite (Ward et al.,
BROMO 2018 - Bromo Conference, Symposium on Natural Products and Biodiversity
4
2016).
6
5.228
0.1070
431.2733
C
18
H
41
NO
10
Unknown
7
5.445
0.0977
466.2989
C
33
H
37
N
3
(1E)-1-(2,2'',4,4'',6,6''-
Hexamethyl1,1':3',1''-
terphenyl-2'-yl)-3-mesityl-1-
triazene
-
8
5.662
0.0169
519.3256
H
34
N
31
OCl
Unknown
9
7.206
4.6301
196.1102
C
11
H
16
O
3
1-carboxy-3-
hydroxyadamantane
-
10
8.006
0.2579
125.1882
C
12
H
25
NO
2
12-Aminododecanoic acid
Hamper expression of
CD
40
(Albertshofer et
al.,2005)
11
8.886
0.0908
119.0941
Unknown
Unknown
12
10.53
3
1.4306
180.1148
C
11
H
16
O
2
2-tert-butyl-4-methoxyphenol
Antioxidant (Lee et al.,
2006)
13
11.01
3
0.6199
224.1886
C
13
H
24
N
2
O
Ethyl (4S)-5-cyclohexyl-2,2-
difluoro-4-{[(2S)-2-{[N-(4-
morpholinylsulfonyl)-L-
phenylalanyl]amino}-4-
pentenoyl]amino}-3-
oxopentanoate
-
14
11.37
9
0.2271
340.1314
C
20
H
20
O
5
Morachalcone A
Tyrosinase Inhibitors
(Nguyen et al., 2012),
inhibition of nitric oxide
(Joo et al., 2014),
pancreatic lipase
inhibitory (Jeong et
al.,2015)
15
11.56
2
3.0017
310.1200
C
14
H
19
N
4
O
2
Cl
Lintopride
Treatment of
gastrointestinal reflux,
nausea and vomiting
(Delvaux et al., 1995)
16
11.99
6
0.1281
332.1961
C
16
H
24
N
6
O
2
8-(4-Ethyl-1-piperazinyl)-3-
methyl-7-(2-methyl-2-propen-
1-yl)-3,7-dihydro-1H-purine-
2,6-dione
-
17
12.43
1
4.2855
503.3096
C
25
H
45
NO
9
Pederin
Antioxidant, anticancer
(Ghoneim, 2013)
18
12.61
4
0.6065
693.3941
C
33
H
59
NO
14
Methyl {[(9Z)-17-
{[(2R,3R,4S,5S,6R)-4,5-
dihydroxy-6-(hydroxymethyl)-
3-{[(2S,3R,4S,5S,6R)-3,4,5-
trihydroxy-6-
(hydroxymethyl)tetrahydro-
2H-pyran-2-yl]oxy}tetrahydro-
2H-pyran-2-yl]oxy}-9-
octadecenoyl]ami no}acetate
-
19
12.91
1
0.2985
363.3127
C
18
H
42
N
5
Cl
Unknown
20
13.20
8
0.7061
276.2087
C
18
H
28
O
2
Phenyl laurate
Antimicroba,
antihipertension (Edwin
and Edmund,1940)
21
13.46
0
0.3641
495.3566
C
24
H
46
N
9
Cl
Unknown
22
13.79
1
2.6389
531.3408
C
2
H
37
N
29
O
2
S
Unknown
Metabolite Profiling of Ethyl Acetate Extract from Marsilea crenata Presl. Using UPLC-QToF-MS/MS
5
23
14.30
6
0.8403
698.5889
C
30
H
75
N
14
O
2
Cl
Unknown
24
15.54
1
21.6948
698.5885
C
8
NO
15
S
6
B
r
2
Unknown
25
16.71
8
11.5201
698.5896
C
43
H
86
S
3
Unknown
26
17.15
3
11.2271
592.2689
C
35
H
36
N
4
O
5
Pheophorbide A
Antiinflamation,
antioxidant (Vencl et
al., 2009), anti-HIV
(Zhang et al., 2003)
27
17.37
0
0.6928
592.2694
C
36
H
40
N
4
S
2
1,1'-(1,4-Butanediyl)bis{2,6-
dimethyl-4-[(3-methyl-1,3-
benzothiazol-2(3H)-
ylidene)methyl]pyridinium}
-
28
18.33
0
33.0776
698.5885
C
8
NO
15
S
6
B
r
2
Unknown
-
Table 1 and Table 2 summarise all the
compounds characterized in ethyl acetate extract of
M. crenata, including retention times, % area,
measured m/z, molecular formula, putative
compounds, and its activity based on references.
In total there were 32 peak of compounds
identified in the DCM solvent, and 28 peak in the
methanol solvent. The use of two types of solvent
aimed to elute the ethyl acetate extract optimally.
From all the peaks, only 36 peaks can be identified,
while the rest are unknown compounds.
Unknown compounds may be identified as
impure compounds which are still detected by the
instrument, or they may be a new compounds, which
is undetectable in chemspider database, especially
unknown compounds with high concentrations.
Based on the results of this study, it is not yet
known which compounds are likely to have activity
as phytoestrogens, but when viewed from the
activity data in Table 1 and Table 2, it is known
some compounds have activity as antioxidants.
Where antioxidants is one form of phytoestrogens
activity, the ER-independent pathway.
Phytoestrogens can work through two pathways,
both ER-dependent and ER-independent pathway.
Although most biological actions of phytoestrogens
are mediated through ERs in cells (ER-dependent),
its can exert antioxidant effects and suppress
oxidative stress through an ER-independent
pathway. Phytoestrogens effectively prevent pro-
oxidant stress by limiting ROS release from
damaged mitochondria, and provides antioxidant
activity in cells (Cui et al., 2013).
4 CONCLUSIONS
From UPLC-QToF-MS/MS analysis, it is
concluded that ethyl acetate extract of M. crenata
leaves contain various types of compounds, either
detected compounds (36 compounds), or unknown
compounds. The unknown compounds still need to
be investigated further, especially those with high
concentrations.
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