Trypsin-Assisted Cell Depletion Method for Wound Healing Assay 
Di Yin
1
, Shihmo Yang
2
, Hongbo Zhang
1
 and Wenjun Zhang
1,3,*
 
1
School of Mechanical and Power Engineering, East China University of Science and Technology, Shanghai, China 
2
Biomedical Science and Technology Research Center, School of Mechatronic Engineering and Automation,   
Shanghai University, Shanghai, China 
3
Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, Canada 
Keywords:
   Wound Healing Assay, Cell Depletion, Cell Patterning, Trypsin. 
Abstract:
   Wound healing assay is a commonly used method in the laboratory to study cell migration ability. Among the 
methods  used  to  create cell-free zone, the widely  used  method, called cell  depletion, will  leave a certain 
amount  of  injured  cells  in  the  migration  regions,  which  will  have  an  impact  on  the  subsequent  healing 
experiments. To this end, we present a trypsin-assisted cell depletion method in wound healing assay to create 
cell-free  zone  without  dead  cells.  This method could  rinse  the  dead  cell  after  applying  depleting  process 
without  interfering  in  the  attachment  of  the  living  cells.  All  the  operation  process  is  accomplished  by 
commonly used equipment and drugs in biological experiments. The effect of the enzyme is controlled by the 
ambient temperature and processing time. The debris of dead cells are easily detached and removed to avoid 
the impact on wound healing assay. This method is expected to combine with other 2D and 3D cell patterning 
methods to form a more reliable cell processing technique.   
1  INTRODUCTION 
The  investigation  of  wound  healing  assay  would 
provide  more  information  about  cell  migration  and 
cell-cell interaction (HE, 2020) for biologist to study 
cellular mechanisms (Grada, 2017), tumor formation 
and  metastasis  (Teleanu,  2019),  and  inflammation 
models  (Biglari,  2019).  The  first  step  in  wound 
healing assay requires creating an artificial cell-free 
zone which have been well developed by researchers. 
And most of these methods can be categorized as cell 
depletion that inevitably causes damage to  the cells 
(Monfared, 2021). Meanwhile, the injured cells may 
remain on substrate, which seriously affect the wound 
healing assay of the rest living cells. In this article, we 
developed a trypsin-assisted method to remove these 
injured cells by controlling the efficacy of trypsin by 
temperature  and  time.  After  comparison,  the  most 
effective processing parameters were obtained. With 
experimental  verification,  this  method  will  have 
negligible side effect on the cells that are prepared for 
the subsequent wound healing assay. This approach 
not only addresses the inherent disadvantage of cell 
depletion, but also makes the process of creating cell-
free zone regions more stable and reliable. 
 
2  METHOD 
The  device  with  stamping  function  used  to  culture 
cell is shown in Figure 1. The top layer of the chip is 
the  Polydimethylsiloxane  (PDMS)  with  pillars 
dimensions of 100 μm height and a 400μm diameter 
fabricated  by  mold,  which  is  made  by 
photolithography  technology.  After  the  PDMS  is 
made, the two ends of the PDMS are punched to 
fabricate the outlet and inlet of the chip. The middle 
layer is a spacer with a hollow cavity made of laser-
cut Acrylic(PMMA) board. And the bottom layer is 
the culture dish substrate used for cell attachment. 
After the oxygen plasma and ultraviolet treatment, 
these three parts are aligned and bonded together by 
double-sided adhesive tapes and use heavy objects to 
press the device for an hour to obtain a fully sealed 
channel with 1mm height and 1cm width. The 
stainless steel needles are inserted at both ends of the 
channel, and the liquid in the channel can be replaced 
through the Teflon tube which are connected with 
syringes. The  PDMS  layer  can be  pressed down so 
that  the  pillars  in  the  central  region  can  touch  the 
bottom  of  the  channel  and  realize  the  stamping 
function.