Knowledge Graphs Can Play Together: Addressing Knowledge Graph Alignment from Ontologies in the Biomedical Domain

Hanna Abi Akl, Hanna Abi Akl, Dominique Mariko, Yann-Alan Pilatte, Stéphane Durfort, Nesrine Yahiaoui, Anubhav Gupta

2024

Abstract

We introduce DomainKnowledge, a system that leverages a pipeline for triple extraction from natural text and domain-specific ontologies leading to knowledge graph construction. We also address the challenge of aligning text-extracted and ontology-based knowledge graphs using the biomedical domain as use case. Finally, we derive graph metrics to evaluate the effectiveness of our system compared to a human baseline.

Paper Citation

in Harvard Style

Abi Akl H., Mariko D., Pilatte Y., Durfort S., Yahiaoui N. and Gupta A. (2024). Knowledge Graphs Can Play Together: Addressing Knowledge Graph Alignment from Ontologies in the Biomedical Domain. In Proceedings of the 16th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - Volume 1: KDIR; ISBN 978-989-758-716-0, SciTePress, pages 416-423. DOI: 10.5220/0013015800003838

in Bibtex Style

@conference{kdir24,
author={Hanna Abi Akl and Dominique Mariko and Yann-Alan Pilatte and Stéphane Durfort and Nesrine Yahiaoui and Anubhav Gupta},
title={Knowledge Graphs Can Play Together: Addressing Knowledge Graph Alignment from Ontologies in the Biomedical Domain},
booktitle={Proceedings of the 16th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - Volume 1: KDIR},
year={2024},
pages={416-423},
publisher={SciTePress},
organization={INSTICC},
doi={10.5220/0013015800003838},
isbn={978-989-758-716-0},
}

in EndNote Style

TY - CONF

JO - Proceedings of the 16th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management - Volume 1: KDIR
TI - Knowledge Graphs Can Play Together: Addressing Knowledge Graph Alignment from Ontologies in the Biomedical Domain
SN - 978-989-758-716-0
AU - Abi Akl H.
AU - Mariko D.
AU - Pilatte Y.
AU - Durfort S.
AU - Yahiaoui N.
AU - Gupta A.
PY - 2024
SP - 416
EP - 423
DO - 10.5220/0013015800003838
PB - SciTePress